PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA59028.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 423aa MW: 47448.1 Da PI: 7.0905

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA59028.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.2	2.8e-35	40	182	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgyW 83 lp G++F+Ptd+el+ e+L++kv+++ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ + +W PKA59028.1 40 LPSGVKFDPTDQELI-EHLEAKVSSQGsrshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSKHFFHRPSKAYTTGTRKRRKiqmecdvqRGETRW 136 699**********.99*99996776553333333666646******.555666799***************85666665433778 PP NAM 84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++tgk+++v+ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l PKA59028.1 137 HKTGKTRPVML-NGRQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 182 *********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MSRISANLID ARLEEHQMSG SKQCPSCGHK LERKPDWFGL PSGVKFDPTD QELIEHLEAK 60 VSSQGSRSHP LIDEFIPTIE GEDGICYTHP EKLPGVTRDG LSKHFFHRPS KAYTTGTRKR 120 RKIQMECDVQ RGETRWHKTG KTRPVMLNGR QKGCKKILVL YTNFGKHRKP EKTNWVMHQY 180 HLGELEEEKE GELVVSKIFY QTQPRQCGWS EKIAGAVAGA GEGGREGSGS CSSSKEVMSR 240 QRDELSSAVA AGMAGYSGME QLQQTDNFSF GPFRKSFDHE VGMGESAAGH SAEASIAAAR 300 GREEDNEPDR QHRRQQAVAA AFSISRPTNP ISGMISPAEL HQTSMVLDDP FQVSRILLQT 360 EKFQHHQQEQ QKLIERSGTG LEELIMGCTS TDMKAQETPI PHPPETEWLK YSYWSPDSHD 420 HHG

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MSRISANLID ARLEEHQMSG SKQCPSCGHK LERKPDWFGL PSGVKFDPTD QELIEHLEAK  60
VSSQGSRSHP LIDEFIPTIE GEDGICYTHP EKLPGVTRDG LSKHFFHRPS KAYTTGTRKR  120
RKIQMECDVQ RGETRWHKTG KTRPVMLNGR QKGCKKILVL YTNFGKHRKP EKTNWVMHQY  180
HLGELEEEKE GELVVSKIFY QTQPRQCGWS EKIAGAVAGA GEGGREGSGS CSSSKEVMSR  240
QRDELSSAVA AGMAGYSGME QLQQTDNFSF GPFRKSFDHE VGMGESAAGH SAEASIAAAR  300
GREEDNEPDR QHRRQQAVAA AFSISRPTNP ISGMISPAEL HQTSMVLDDP FQVSRILLQT  360
EKFQHHQQEQ QKLIERSGTG LEELIMGCTS TDMKAQETPI PHPPETEWLK YSYWSPDSHD  420
HHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-120	NAC family protein