PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58982.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family HSF
Protein Properties Length: 315aa    MW: 36049.6 Da    PI: 4.7041
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58982.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.61.1e-34371282102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k++e++ed+++++++sws   nsf+v+d++ fa ++Lp+yFkh nf+SF+RQLn+YgF+kv+ ++         weF++++F  g+++ll++ik
    PKA58982.1  37 FLTKTFEMVEDPSTDSVVSWSVARNSFIVWDSHAFAADLLPRYFKHGNFSSFIRQLNTYGFRKVDPDR---------WEFANEEFLGGQRHLLKNIK 124
                   9********************999*****************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+++
    PKA58982.1 125 RRRN 128
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDTVVELVLI KEEENGDEEA MAPQPLPGLH DAAPPPFLTK TFEMVEDPST DSVVSWSVAR  60
NSFIVWDSHA FAADLLPRYF KHGNFSSFIR QLNTYGFRKV DPDRWEFANE EFLGGQRHLL  120
KNIKRRRNVG QSSAEAGQLG LESEVERLRR ERHVLMMEIM RLRQQQQSSR IQLLAMEDRM  180
LGAERKQQQT MAFLSKSLKN PEFIQKLLLR SEQRRELGSP GKKRRVLPAA AGDGGVAAEV  240
ERFLSTMESE ESRSMRNEEG MEFMARSTAE IPDSLWEVLL NENLGEEQTT EVETSGWGED  300
VKDLVEQMQF LGSED
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120126LKNIKRR
2147152RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.11e-77HSF family protein