PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA58875.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

STAT

Protein Properties

Length: 694aa MW: 77336.5 Da PI: 5.2916

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA58875.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	167.9	1.8e-52	226	345	1	119
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypfl 98 ldvvll+ gq v+kd+ev+asL+yad+g++vek+ d+ ea LL+s++G+e++s d+p+ l Gra+fklkisqLssk+dnrLfr++f+ + k+ypfl PKA58875.1 226 LDVVLLDVEGQVVHKDMEVIASLVYADNGALVEKTqDNPEASLLTSCEGLEYPSIDKPVALFLGRATFKLKISQLSSKSDNRLFRVCFRASRDKNYPFL 324 8********************************6778******************************************************** PP STAT 99 eavskpirCisrsrntrsssl 119 ea+s pirCisr+r +r++ PKA58875.1 325 EACSPPIRCISRNRFVRPVVP 345 ************9998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 694 aa Download sequence
MAGDEGGEED YSMLRDVRLS IDRDEAVREE AGFSLGLWIY LSSSARPSSL ILRQTSLESE 60 DEVPFLALSE ENKLALFPLR FLHNGAPSAD SSFPWSNIPH VSSENECPLE KWFHVGCEVT 120 INNMRLYFNG ELVGDMPLSS SDDHLLDYVK NVTVVGNNGK DDRLLGFVYN ACVLPLSASL 180 KDAFTQNQPV KLSLNGSCIS EAIEVGSDGV WSIVGGKASC RRNFSLDVVL LDVEGQVVHK 240 DMEVIASLVY ADNGALVEKT QDNPEASLLT SCEGLEYPSI DKPVALFLGR ATFKLKISQL 300 SSKSDNRLFR VCFRASRDKN YPFLEACSPP IRCISRNRFV RPVVPSKRQM PTVLLPDKNP 360 PEISDRPQLN NNYNGAFSKR LKVGLEKLSR EVGANGKLEQ NGKALKMSSE VKPNNFDGTD 420 STTPSDSEST DARNCEAKWI GESIDPTSDV VIFRYCIEGT YERSLLLKEI IKYSGSEELV 480 NFSEQVCLYS GCLHHRYSIL ISKQLVHEGN DTWDSISKNG NQALWLTAAP EINKRFMSIS 540 RSITRGLSAK DMEVLRRIAG CGEELGQEHF YKMWHWLYPV AVALSKDPIN ALWECSLPRW 600 IEGFITGEEA ENSLKGSRGF QKAGTFVLRF PISRSWPHPD AGSLVVTYVG ADSTVHHRLL 660 SLDLSSNNKE NGHELLQNML LEESELSQLG RVVR

Sequence ? help Back to Top

Protein Sequence Length: 694 aa Download sequence

MAGDEGGEED YSMLRDVRLS IDRDEAVREE AGFSLGLWIY LSSSARPSSL ILRQTSLESE  60
DEVPFLALSE ENKLALFPLR FLHNGAPSAD SSFPWSNIPH VSSENECPLE KWFHVGCEVT  120
INNMRLYFNG ELVGDMPLSS SDDHLLDYVK NVTVVGNNGK DDRLLGFVYN ACVLPLSASL  180
KDAFTQNQPV KLSLNGSCIS EAIEVGSDGV WSIVGGKASC RRNFSLDVVL LDVEGQVVHK  240
DMEVIASLVY ADNGALVEKT QDNPEASLLT SCEGLEYPSI DKPVALFLGR ATFKLKISQL  300
SSKSDNRLFR VCFRASRDKN YPFLEACSPP IRCISRNRFV RPVVPSKRQM PTVLLPDKNP  360
PEISDRPQLN NNYNGAFSKR LKVGLEKLSR EVGANGKLEQ NGKALKMSSE VKPNNFDGTD  420
STTPSDSEST DARNCEAKWI GESIDPTSDV VIFRYCIEGT YERSLLLKEI IKYSGSEELV  480
NFSEQVCLYS GCLHHRYSIL ISKQLVHEGN DTWDSISKNG NQALWLTAAP EINKRFMSIS  540
RSITRGLSAK DMEVLRRIAG CGEELGQEHF YKMWHWLYPV AVALSKDPIN ALWECSLPRW  600
IEGFITGEEA ENSLKGSRGF QKAGTFVLRF PISRSWPHPD AGSLVVTYVG ADSTVHHRLL  660
SLDLSSNNKE NGHELLQNML LEESELSQLG RVVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	1e-165	STAT family protein