PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA58849.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 333aa MW: 36993.4 Da PI: 9.8104

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA58849.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.4	2.8e-32	161	214	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PKA58849.1 161 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 214 9****************************************************7 PP
2	Myb_DNA-binding	47.1	5.6e-15	162	213	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ PKA58849.1 162 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 213 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MELFPAQPDL SLQISPPSKS KPSSSWRAAA EESMDFEFWR RTLEANSPAA AVAAPSKSSV 60 PAGGGAGAGV CFDLSLSTPN HHHHRPFPHE PNRHDLSSLR PIRGIPVYHS PPSFSFLPPH 120 QNYHWQHLRQ NFQQEISPPT TSGPLGFSKS RFPVKRSMRA PRMRWTSTLH ARFVHAVELL 180 GGHERATPKS VLELMDVKDL TLAHVKSHLQ MYRTVKTTDH KASPSDQTEA IEIFDDNLFD 240 LNNIVHGSEA SAHEKGRLIG KKTTSSYGLW SNSSSKGSLF HDKPKDSNTG SMSSFENEKQ 300 SRSFEMISDL NSSCQSATSS KKPNLEFTLG RPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	3e-51	G2-like family protein