PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA58704.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 242aa MW: 27536.8 Da PI: 7.637

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA58704.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	111.6	3.7e-35	140	194	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHerFveav++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ PKA58704.1 140 KPRMRWTPELHERFVEAVNHLGGSERATPKGVLKLMQVDGLTIYHVKSHLQKYRT 194 79****************************************************8 PP
2	Myb_DNA-binding	58.5	1.5e-18	142	193	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++v+av+ lGg t+k + + m+ g+t +++ks++qky+ PKA58704.1 142 RMRWTPELHERFVEAVNHLGGSeraTPKGVLKLMQvDGLTIYHVKSHLQKYR 193 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MGVAYSPARF RISSSNTRAY RPSTDNYHQE LNENPWCPDA LRDILDYPNC VTIESGQIQS 60 NCAIHVGSMK QNEWSDLTEL MDNYCRDLMD EIGSSNSELK VVKQSSDASI HHTNTYQSIS 120 SVELGSISGT TFSTNATVAK PRMRWTPELH ERFVEAVNHL GGSERATPKG VLKLMQVDGL 180 TIYHVKSHLQ KYRTTRYRTE SSEDRQTKRA KALRQLRSSL VNLDFGSWLM SPPHLIEEEK 240 PR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	7e-41	G2-like family protein