PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA58524.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 334aa MW: 37751.6 Da PI: 6.6457

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA58524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.3	1.5e-32	28	82	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLHe+Fveav++LGG+ekAtPkt+++lm+++gLtl+h+kSHLQkYRl PKA58524.1 28 KPRLKWTPELHEHFVEAVDKLGGPEKATPKTLMRLMGIPGLTLYHLKSHLQKYRL 82 79****************************************************8 PP
2	Myb_DNA-binding	64.4	2.2e-20	30	81	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++e +v+av +lGg+ t+kt +r mg g+tl+++ks++qky+ PKA58524.1 30 RLKWTPELHEHFVEAVDKLGGPekaTPKTLMRLMGiPGLTLYHLKSHLQKYR 81 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MYHHLHHLPS ERTTLASNSG LVLSTDAKPR LKWTPELHEH FVEAVDKLGG PEKATPKTLM 60 RLMGIPGLTL YHLKSHLQKY RLSKNIHVQA TGATEKNGFT TAEERTSESS RPVVSFINGD 120 SHSNKNVQIS ETLQVQIEVQ KRLNEQLEVQ RRLQMRIEAQ GKYLQSVLEK AQQTLGRKNL 180 CSVGIEAAKV HISELVSKVS KECFPVFSDI PVLQFADYSM DSCLTTCEGS QKEPNTDMIL 240 GNYHDMNDYR VSSQMRMKDL NSISNPNELK TCLLEEEGER GGNRRAPMQL NSPKNSMDYK 300 PPFAAGELDL NVENENNDSV SNCKEFDLND FCWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-86	G2-like family protein