PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58224.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 285aa    MW: 31269.9 Da    PI: 6.4104
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39.2e-193079255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+GVr++  +g+WvAeIr+p++   r+r++lg+f ta+eAa a++ a+++l+g
  PKA58224.1 30 EYRGVRQRT-WGKWVAEIREPKK---RTRIWLGSFSTADEAALAYDDAARRLYG 79
                69****999.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MENFIKRPPP RPWKKVPARG KGGPQNSSCE YRGVRQRTWG KWVAEIREPK KRTRIWLGSF  60
STADEAALAY DDAARRLYGP DAYLNLPHLR SISSASATAG KSFSSRHRLL RWLPSSAARS  120
IPPCGLLNIG AQHNVHVIHQ RLQEFKNNSK SSSSSASSAA AKAAEPERID VGRPQIDLKE  180
FLQQLGVIKE DKETDGGEVA APPETGGEDG RRMEEEKMGG GEGCSEGINE ELINNWNDDA  240
LEEIRAFEDH TAAVVVAGGG GGMETALMYD VHDDLSLPNI SIWDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.15e-49ERF family protein