PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58116.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Dof
Protein Properties Length: 215aa    MW: 23048.2 Da    PI: 9.1006
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58116.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.63.1e-392279562
      zf-Dof  5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                alkcprCdstntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ s
  PKA58116.1 22 ALKCPRCDSTNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRPS 79
                689****************************************************865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MAAKFNSAAG VTVGQQNSGG PALKCPRCDS TNTKFCYYNN YSLSQPRHFC KACKRYWTRG  60
GTLRNVPVGG GCRKNKRPSK PNPAVGKIRP PTTETLQLPP LPPANSAANG FFLPWFDLDL  120
QPLGYEELFK SGISGHLPDL RQPLLDSQTL AATAAAENFL PWVSCDDFPA MSVAGAQNPL  180
DGICSSFPGK SPYLYLAGDG GAIVPSNHHL HARTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.17e-35Dof family protein