PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58065.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 306aa    MW: 33358.2 Da    PI: 5.9773
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.4e-20155204255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+WvAeIr p++   r r +lg+f+taeeAa a+++a+ +l+g
  PKA58065.1 155 LYRGVRQRH-WGKWVAEIRLPRN---RSRLWLGTFDTAEEAAMAYDKAAFRLRG 204
                 59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MAAAIDLCDS RSALSSDPLR EELMEALEPF KSASSSPSII PFDSSSASSS PLPAFSLPSY  60
PTSYYLGSSS LSASSKNPVF GYSLPSLSSS PAAHQGFLSS DRTIGLNHLG RAQIQQIQSQ  120
IQLRHRLSPR SQFMKLAGAA VSPPPAAAVT KPTKLYRGVR QRHWGKWVAE IRLPRNRSRL  180
WLGTFDTAEE AAMAYDKAAF RLRGDFARLN FPHLRHAAGV ELQSSVDAKL RAICEGLAEP  240
QKPPAEADAD ASQKPENSSD GDESAGSSPL SEMENLDFTE APWDESESFV LRKYPSWEID  300
WDSILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.16e-46ERF family protein