PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA57894.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 375aa MW: 41451 Da PI: 6.2864

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA57894.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.3	1.5e-32	236	290	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt eLHerFv+av++L G+ekAtPk +l+lm+v+gLt++hvkSHLQkYRl PKA57894.1 236 KQRLRWTLELHERFVDAVKKLDGPEKATPKGVLKLMNVDGLTIYHVKSHLQKYRL 290 79****************************************************8 PP
2	Myb_DNA-binding	56.5	6.2e-18	238	289	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdavk+l g+ t+k + + m+ g+t +++ks++qky+ PKA57894.1 238 RLRWTLELHERFVDAVKKLDGPekaTPKGVLKLMNvDGLTIYHVKSHLQKYR 289 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MNIHGGVSVS VNQSSHGGLY TSQAAPSSTQ RLVDDSFSDT ELSSNGQLEL VGPSDRHQKN 60 SFHLKQSGPE FESRDLQYSE KVFLRCSARS ENLFSSSLPY PETRQPLNQL PLPLNSPKCE 120 PITSTIESST SVLLLGNEIN EIQEEDVHSD DLLKDFLNLP EDTADGNLQM DLQILSDQLG 180 IAITDSGESP RLDDIYEPSH GLPSFQITCK TANQQVETSK VCVQTKSTNS STAASKQRLR 240 WTLELHERFV DAVKKLDGPE KATPKGVLKL MNVDGLTIYH VKSHLQKYRL AKYLPETKEG 300 DLCLSKTSSH LVGSVIAKFP VKLLVNGILM SLFFQVIQRT TCVKLVQVAK SVILLTNILK 360 FDCHGSYYCA IISPV

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MNIHGGVSVS VNQSSHGGLY TSQAAPSSTQ RLVDDSFSDT ELSSNGQLEL VGPSDRHQKN  60
SFHLKQSGPE FESRDLQYSE KVFLRCSARS ENLFSSSLPY PETRQPLNQL PLPLNSPKCE  120
PITSTIESST SVLLLGNEIN EIQEEDVHSD DLLKDFLNLP EDTADGNLQM DLQILSDQLG  180
IAITDSGESP RLDDIYEPSH GLPSFQITCK TANQQVETSK VCVQTKSTNS STAASKQRLR  240
WTLELHERFV DAVKKLDGPE KATPKGVLKL MNVDGLTIYH VKSHLQKYRL AKYLPETKEG  300
DLCLSKTSSH LVGSVIAKFP VKLLVNGILM SLFFQVIQRT TCVKLVQVAK SVILLTNILK  360
FDCHGSYYCA IISPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	9e-43	G2-like family protein