PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA57811.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family HB-other
Protein Properties Length: 270aa    MW: 30017.8 Da    PI: 7.9733
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA57811.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.54e-1761116156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 r++  ++t++q++ +ee+F+ +++p+  +r e+++ lgL+  q+k+WFqN+R++ k
  PKA57811.1  61 RKSYLRHTDDQIQFMEEVFKVCQHPDDMMRIEMSQTLGLKPMQIKFWFQNKRTQIK 116
                 6788899*********************************************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MKEGQEQQGF AHEERELQEL AESNGFSDIY LQLGIEENPN PNPNPNPNNP SANKRKRPSR  60
RKSYLRHTDD QIQFMEEVFK VCQHPDDMMR IEMSQTLGLK PMQIKFWFQN KRTQIKNQQE  120
RMENQRLRSE NERLRFENSK YVEALKCVVC PNCTATPFMD TLSPKSHILL QNNQLKREIM  180
RMLAVAAQRR QSMASSSSLS MDRQEVAGVG GFPAVGGMVM GAGGSDAATF IGETGASVVT  240
DYGAHAGSGA GGWPGDPALG MGGSKTGNAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.18e-38HD-ZIP family protein