PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA57411.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 244aa MW: 26406.6 Da PI: 8.2067 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.8 | 1.2e-17 | 30 | 80 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s++ GVr++ +g+WvAeI+d ++ r++lg+f taeeAa+a+++a++ l+g PKA57411.1 30 SKFVGVRQRL-SGKWVAEIKDsT----RKIRIWLGTFRTAEEAARAYDEAALLLRG 80 79*****999.7*********33....35***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MEIHFQRQQP IAPLKPKSRG RGGGGGCGRS KFVGVRQRLS GKWVAEIKDS TRKIRIWLGT 60 FRTAEEAARA YDEAALLLRG SNTRTNIAAC RSSPPASACS PVAARIEKLL LRKQQARESP 120 AILPPSSTTF TSSPTTSTSA DTAESSGSSQ GSPATSNGDG FELGWSAVPE PSWDFDFSWF 180 DMTNELSAGF CLTEMTAATA GEVSEFERQL SASLYPVNGV RECFEAVQDP MWDLPPPLQL 240 RRSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 1e-15 | ERF family protein |