PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA57384.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Protein Properties

Length: 407aa MW: 47285.4 Da PI: 10.296

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA57384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	37.6	4e-12	12	94	2	90
EEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 fkv+ ++ +rl++p +f + ++ ++ +l+++ gr+W vkl ++ g+ ++++GW +Fv + + g+f++F +dg +f PKA57384.1 12 FKVM--IGDFQ-RRLRIPPSFQ--NllrRAVP--VVDFMLRSRGGREWAVKL--KRENGGLFFGEGWDGFVADLAIGLGEFLIFVYDGYLGF 94 5656..44444.46999996..33464443..468***********..99999************************9986666 PP
2	B3	51.5	1.9e-16	183	265	11	98
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++++ +++p++f +e+++ k + +++l+d++ r+W v++ +gr+ l++GW +F + n L+egD++vF++ + + +v++fr PKA57384.1 183 SRENYMTIPRSFEKECKLRKMN--DIILQDSKWRTWPVRI--ADWRGRVALATGWAKFRDGNYLEEGDVCVFEFLQ-ANYAIRVHIFR 265 566789********999766..7***********..77778899*********************887.44446888887 PP
3	B3	50.3	4.3e-16	318	399	14	99
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +l +pk ++e++ + + +l+d grs++v+++ + +gr vl++GW++F +an+++egD+++F++ g e++v+++r+ PKA57384.1 318 YNLNIPKYVLKENDATN-I-HETILYDACGRSFSVQIS-HRADGRLVLARGWSKFWNANNIQEGDICIFRHAG-GIHEMTVQIHRA 399 4589*******6553.3.37999********6.666789***********************988.666679999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MEKPLWERDS FFKVMIGDFQ RRLRIPPSFQ NLLRRAVPVV DFMLRSRGGR EWAVKLKREN 60 GGLFFGEGWD GFVADLAIGL GEFLIFVYDG YLGFDVKIYG ITGCEKEECT AIIKKEEILE 120 DEVKGQSDKS INRLFQGRKR NREVVNGHVI LEGNQVFNNK RALESARSFK STRPFFIATC 180 RSSRENYMTI PRSFEKECKL RKMNDIILQD SKWRTWPVRI ADWRGRVALA TGWAKFRDGN 240 YLEEGDVCVF EFLQANYAIR VHIFRVKEYD VPDRRKIGNR KRHTRTYKRK VKSKGLEAEK 300 SFRTVESFAS VCIRSRKYNL NIPKYVLKEN DATNIHETIL YDACGRSFSV QISHRADGRL 360 VLARGWSKFW NANNIQEGDI CIFRHAGGIH EMTVQIHRAG LLAITAG

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MEKPLWERDS FFKVMIGDFQ RRLRIPPSFQ NLLRRAVPVV DFMLRSRGGR EWAVKLKREN  60
GGLFFGEGWD GFVADLAIGL GEFLIFVYDG YLGFDVKIYG ITGCEKEECT AIIKKEEILE  120
DEVKGQSDKS INRLFQGRKR NREVVNGHVI LEGNQVFNNK RALESARSFK STRPFFIATC  180
RSSRENYMTI PRSFEKECKL RKMNDIILQD SKWRTWPVRI ADWRGRVALA TGWAKFRDGN  240
YLEEGDVCVF EFLQANYAIR VHIFRVKEYD VPDRRKIGNR KRHTRTYKRK VKSKGLEAEK  300
SFRTVESFAS VCIRSRKYNL NIPKYVLKEN DATNIHETIL YDACGRSFSV QISHRADGRL  360
VLARGWSKFW NANNIQEGDI CIFRHAGGIH EMTVQIHRAG LLAITAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-21	B3 family protein