PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA57264.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 395aa    MW: 43529.4 Da    PI: 8.147
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA57264.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2188.2e-065274123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                + C+ Cgk F r  nL+ H r H
  PKA57264.1 52 FACEVCGKGFQREQNLQLHRRGH 74
                78*******************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MEEDSNPTGS AQACASSTPN PAKKKRSHPG NPDPNAEVIA LSPESLLATN RFACEVCGKG  60
FQREQNLQLH RRGHNLPWKL KQKTSGEAAR KKVYVCPEPS CQHHHPSRAL GDLTGIKKHF  120
FRKHGEKKWS CDKCSKKYAV LSDWKAHSKI CGTKEYKCDC GSIFSRRDSF ITHRAFCDAL  180
AEESTRTTAR ANYPFPNFDH HQNHLLLPQP TLPLQISESI HQWLPPSSSS SSTIYSNLLP  240
PPPPPPTLPC LFQASRPSSH LSATALLQKA ADQLGTAMAG PSELHGLYSS SSSPHLLQEM  300
MMGTFPCFEE DMGGMMVAPK REEGGDGELF MAERRLPITI RSEGMTRDFL GLRENGEQKE  360
EEEELLAMAG LMGTGMGSSS SSSSFMLPGL PPRKM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12328KKKRSH
22429KKKRSH
37992KLKQKTSGEAARKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55110.11e-102C2H2 family protein