PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA57076.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MIKC_MADS
Protein Properties Length: 229aa    MW: 26370.8 Da    PI: 9.7516
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA57076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.61.2e-31959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gklyeys+
  PKA57076.1  9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSNKGKLYEYST 59
                79***********************************************96 PP
2K-box105.18.3e-35841721098
       K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                 e+  +++++ e++kLk+++e+Lq++qRhl+Ge+L+sLs+ke+q+LeqqLe+slk+iRskK++ll+++i+elq+ke+ lqe+nk+++k++
  PKA57076.1  84 EADPQANWCLEYNKLKARVESLQKSQRHLMGEQLDSLSVKEIQHLEQQLESSLKHIRSKKTQLLIDSISELQRKENILQEQNKNMEKEI 172
                 5556789******************************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFSN KGKLYEYSTD  60
SSMERILERY ERYSYTERAL FSNEADPQAN WCLEYNKLKA RVESLQKSQR HLMGEQLDSL  120
SVKEIQHLEQ QLESSLKHIR SKKTQLLIDS ISELQRKENI LQEQNKNMEK EIIAKEKAKS  180
LAQNASFEQQ NQSQYSSSSP HVLVSVSAPT CISRYGGQIS EASQTSKQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.15e-86MIKC_MADS family protein