PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PKA57072.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 202aa MW: 21728 Da PI: 6.6754 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 184.7 | 7.4e-58 | 19 | 114 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplk+yl+k+re+egek PKA57072.1 19 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKFREMEGEK 114 89*******************************************************************************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 202 aa Download sequence |
MADSDNESGG ISNSTTGNRE QDRFLPIANV SRIMKKALPA NAKISKDAKE TVQECVSEFI 60 SFITGEASDK CQREKRKTIN GDDLLWAMTT LGFEEYVEPL KIYLQKFREM EGEKCAGAGG 120 SQSQQKDGGG GGGDGGASSG FSGGVAGMYG GVGGGLMMMG QQMYGSPPSQ SYHHHHHHHH 180 HQQQQGSYIK SKSQSVAHEI ET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G14540.1 | 1e-71 | NF-YB family protein |