PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA56875.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 203aa MW: 22196.8 Da PI: 9.7615 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.5 | 5.3e-21 | 18 | 67 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa a+++a+++++g PKA56875.1 18 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEGAAIAYDEAALRFKG 67 69*******.**********94....45***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MKLKYGMQIN EGSEKKQHYR GVRQRPWGKW AAEIRDPKKA ARVWLGTFDT AEGAAIAYDE 60 AALRFKGTKA KLNFPERVQG RTDLGFVVSQ GIPARRPPEQ AAMHGVLQPP AVALDPDLAQ 120 YAQILQSRDE DLQNVASGLY GRGLTFTAGA AGSAPETISF SGYSSPSSYM TSEVMLHFGS 180 SSTSSSSTSW PQRDHRDEGS RNT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 8e-34 | ERF family protein |