PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA56785.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

FAR1

Protein Properties

Length: 794aa MW: 91422.9 Da PI: 6.5427

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA56785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	89.3	5.4e-28	70	158	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY +YA++vGFsvr+sks++s+++++i++r+fvCskeg++ ++ + + k++r+ra+ r gC+a+++v +++ g+w+vtkl++eHnH + PKA56785.1 70 FYMAYASRVGFSVRISKSRRSRNDESIIMRRFVCSKEGFHLKKGNYdDGKKKRKRATIREGCNAMIEVIQKYYGRWVVTKLVKEHNHVV 158 9*************************************9998875788999********************************76 PP
2	FAR1	77.5	2.5e-24	192	281	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YA+++GF+vr++ s++s+r++++++r+fvC+keg++ e++ ++k++r+r+ +r +Cka+++v k+++++w v+kl+++H+H+la PKA56785.1 192 FYYAYASRIGFDVRIRLSRRSTRDETFVMRRFVCTKEGFTPFEENFdESKKKRNRTPSRQECKAMFEVIKKDSERWIVSKLVTDHTHDLA 281 9************************************9877665477889999******************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 794 aa Download sequence
MESTSTEDEG SLRENDVDLN NENMEQQMTM EVGSHFADSE NLLTSHEETL ENVEPFIGME 60 FESEEAAKLF YMAYASRVGF SVRISKSRRS RNDESIIMRR FVCSKEGFHL KKGNYDDGKK 120 KRKRATIREG CNAMIEVIQK YYGRWVVTKL VKEHNHVVAA PSRVRYIAPE AYAGMEPFVG 180 MEFPSHEAAQ TFYYAYASRI GFDVRIRLSR RSTRDETFVM RRFVCTKEGF TPFEENFDES 240 KKKRNRTPSR QECKAMFEVI KKDSERWIVS KLVTDHTHDL AVAPNKVHYI QSQSEVVVLA 300 KNASSREKPA PPVNFKPQLG DGFGDFDVLS SNDQDSRTDL RNACQSAFGL EDLQILLDSL 360 KKMQAESPAF FYVFQVDKNN QITNIFWADA KAKMAYYCFG DVVTLDTSCK ENKSMLPFVM 420 FTGVNHHLQS VAFGCALLID ESEASFTWLF ENWLVAMCGR PPISIVTDYH EAMTAAIARV 480 FPDARHQLSR YHILKKSQEE LSNVYLAHDS FEIEFLKCID ESETVETFEL HWKSILDKYD 540 LSDNCWLQLL HSIRHKWASV YHKDTFTADI SLPEKPESLS LFFEKYFNRK TSLQIFVTIL 600 DQAMAVWYER EALEDFASSC TRPTLITPSN MLKQAAEIYT RTIFEVFQKE FVESLGYFID 660 NIDSGGVISK YNVTKDDSHN FVVTHNSSDK RTSCSCCMFE RSGILCRHIL RLFLSINVRA 720 LPEHYILKRW TKDAKNGFVL DECARYSDLV CHVIRYAKEG STSPDVFNIA KHALQMAFTE 780 VLAAKKDIAS RCAM

Sequence ? help Back to Top

Protein Sequence Length: 794 aa Download sequence

MESTSTEDEG SLRENDVDLN NENMEQQMTM EVGSHFADSE NLLTSHEETL ENVEPFIGME  60
FESEEAAKLF YMAYASRVGF SVRISKSRRS RNDESIIMRR FVCSKEGFHL KKGNYDDGKK  120
KRKRATIREG CNAMIEVIQK YYGRWVVTKL VKEHNHVVAA PSRVRYIAPE AYAGMEPFVG  180
MEFPSHEAAQ TFYYAYASRI GFDVRIRLSR RSTRDETFVM RRFVCTKEGF TPFEENFDES  240
KKKRNRTPSR QECKAMFEVI KKDSERWIVS KLVTDHTHDL AVAPNKVHYI QSQSEVVVLA  300
KNASSREKPA PPVNFKPQLG DGFGDFDVLS SNDQDSRTDL RNACQSAFGL EDLQILLDSL  360
KKMQAESPAF FYVFQVDKNN QITNIFWADA KAKMAYYCFG DVVTLDTSCK ENKSMLPFVM  420
FTGVNHHLQS VAFGCALLID ESEASFTWLF ENWLVAMCGR PPISIVTDYH EAMTAAIARV  480
FPDARHQLSR YHILKKSQEE LSNVYLAHDS FEIEFLKCID ESETVETFEL HWKSILDKYD  540
LSDNCWLQLL HSIRHKWASV YHKDTFTADI SLPEKPESLS LFFEKYFNRK TSLQIFVTIL  600
DQAMAVWYER EALEDFASSC TRPTLITPSN MLKQAAEIYT RTIFEVFQKE FVESLGYFID  660
NIDSGGVISK YNVTKDDSHN FVVTHNSSDK RTSCSCCMFE RSGILCRHIL RLFLSINVRA  720
LPEHYILKRW TKDAKNGFVL DECARYSDLV CHVIRYAKEG STSPDVFNIA KHALQMAFTE  780
VLAAKKDIAS RCAM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-159	FAR1 family protein