PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA55730.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 445aa MW: 49831.5 Da PI: 10.1664

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA55730.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.8	4.3e-32	275	328	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PKA55730.1 275 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 328 9****************************************************7 PP
2	Myb_DNA-binding	46.5	8.6e-15	276	327	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ PKA55730.1 276 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 327 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MITNAHEVKD NKILNTHLFP LSLSLSLSLS LSLSFSLSSV IVYPILPTKK QETTTFTPFF 60 HCKSYCVFIN LSLYTHTSFK SPSSSCCRRR REQGGRERER GFLLALLALL HLRKRSPIME 120 LFPAQPDLSL QISPPSTAVE ESLDFGYWRR SPRGGGSGLP PAKPAAGSVT GFDLSLTSPS 180 PSQPSNIPSS NPHRHSPFLH DSHGQDLGSL RPIRGIPVYY SPQSLHLPPP YHHHHHHHQH 240 FCDSPAVTTP MTFTRPSSSS RFLPRFPAKR SIRAPRMRWT STLHARFVHA VELLGGHERA 300 TPKSVLELMD VKDLTLAHVK SHLQMYRTVK TTDKAASSSG QSEPIEISDD NLFDIINGHT 360 SESSIQNGNS EVKNDTNTYE LWSNALRKEG VNRDKRKESK TGSISSFERK NQARSFEMMS 420 DISSSVLLEN ISKKPNLEFT LGRPQ

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MITNAHEVKD NKILNTHLFP LSLSLSLSLS LSLSFSLSSV IVYPILPTKK QETTTFTPFF  60
HCKSYCVFIN LSLYTHTSFK SPSSSCCRRR REQGGRERER GFLLALLALL HLRKRSPIME  120
LFPAQPDLSL QISPPSTAVE ESLDFGYWRR SPRGGGSGLP PAKPAAGSVT GFDLSLTSPS  180
PSQPSNIPSS NPHRHSPFLH DSHGQDLGSL RPIRGIPVYY SPQSLHLPPP YHHHHHHHQH  240
FCDSPAVTTP MTFTRPSSSS RFLPRFPAKR SIRAPRMRWT STLHARFVHA VELLGGHERA  300
TPKSVLELMD VKDLTLAHVK SHLQMYRTVK TTDKAASSSG QSEPIEISDD NLFDIINGHT  360
SESSIQNGNS EVKNDTNTYE LWSNALRKEG VNRDKRKESK TGSISSFERK NQARSFEMMS  420
DISSSVLLEN ISKKPNLEFT LGRPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	3e-46	G2-like family protein