PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA55687.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 198aa MW: 21252 Da PI: 7.7934 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.6 | 1.3e-17 | 35 | 85 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + ++GVr++ +g+WvAeIr+p + r +r +lg+f t +Aa+a+++a+++l+g PKA55687.1 35 CPFRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFSTSLDAARAYDHAARSLYG 85 679****999.**********8...3.35***********************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MSDVAGDEKK KKRCPLRRSR KGCMKGKGGP ENPLCPFRGV RQRTWGKWVA EIREPNRGAR 60 LWLGTFSTSL DAARAYDHAA RSLYGDCARL NLPTGQQPPP SGIPEPALAA STVSPCSSST 120 AGLTAPSSSP QARYSGHEGM VSDLDEYVMR LPKAEDFGLD AFHEIATVGE EIGGAGDLEV 180 EAGPMSFVGL QQQLSWCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 9e-41 | ERF family protein |