PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA55611.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family B3
Protein Properties Length: 296aa    MW: 33578.1 Da    PI: 10.8177
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA55611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.83e-1151141190
                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                 ff +l+p+ ++ ++ l+lp +f  ++  g+    ++  tl +++g+sW+v +  +  s ry+ ++ W++ vk+++L +g  ++F ++g+  f
  PKA55611.1  51 FFRILLPELNFFNQ-LRLPLSFGGRFlkGKTGDHQIRATLVNPKGKSWRVDIYKDSDSIRYFGGEAWRDLVKSHRLGAGFLLLFDFKGDLIF 141
                 67777777777776.*******9999973333467899**************55777777************************98876444 PP
2B337.34.7e-121972801790
                 E--HHH.HTT...............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
          B3  17 vlpkkfaeeh...............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                 v++ +f++++               gg    ++   l d++gr W v+l  r k+++  l+kGW +F++  +L+++D +vF ld+++ +
  PKA55611.1 197 VISSSFLRSYlnvpqackqvvqlsrGG---IGTLAALVDPKGRMWPVRL--RSKGSTARLSKGWLQFARRYKLNVRDRCVFVLDHSELG 280
                 666666666665555555456554332...567899*************..88888999***********************9986555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MAMPPVPPLK VYIKRKKMKK PAKTEDEDES PRKKTISAST LSTVPAASSS FFRILLPELN  60
FFNQLRLPLS FGGRFLKGKT GDHQIRATLV NPKGKSWRVD IYKDSDSIRY FGGEAWRDLV  120
KSHRLGAGFL LLFDFKGDLI FDFRVYDLST SEVNNYPSDG FTTCNVGDVK LKERMMIRKE  180
AIKGSTVALS SRAFEAVISS SFLRSYLNVP QACKQVVQLS RGGIGTLAAL VDPKGRMWPV  240
RLRSKGSTAR LSKGWLQFAR RYKLNVRDRC VFVLDHSELG YPKILLNVQI FKRDRD