PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA55439.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family HSF
Protein Properties Length: 316aa    MW: 34795.1 Da    PI: 8.2632
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA55439.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.61.1e-34211142103
                   HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 
                   Fl+k+y++++d+++++++sw  ++  +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+kv  e+         weF+++ F+kg+k+ll++i
    PKA55439.1  21 FLTKTYQLVDDPSTDHIVSWGdDRVPTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKVVPER---------WEFANEFFRKGEKHLLCEI 108
                   9********************66679****************************************999.........******************* PP

                   XXXXXX CS
  HSF_DNA-bind  98 krkkse 103
                   +r+k++
    PKA55439.1 109 HRRKTS 114
                   ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MVERTWPENE GEGVRELPAP FLTKTYQLVD DPSTDHIVSW GDDRVPTFVV WRPPEFARDL  60
LPNYFKHNNF SSFVRQLNTY GFRKVVPERW EFANEFFRKG EKHLLCEIHR RKTSATVTPA  120
NSPPPPQSPF PPLFQIPFDD YHHYQQHLAV GPVRSALTGD GGAGSPAAAL IKKNERLRQS  180
NAALLSELTH MRRLYNDIIF FVQHHVQPVA PSSAPDPSFP FNGSFSRRRT PPAVLNSGGS  240
ATSSSSLTIA DEPPPPLETE GKDSGSSGSP AKLFGVILGA KRAEAPAEPA PPSTKPRLVL  300
NEDGLGVGRS PCSSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46264.13e-77HSF family protein