PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA55134.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | bHLH | ||||||||
Protein Properties | Length: 249aa MW: 27182.7 Da PI: 6.7756 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.9 | 2.4e-10 | 161 | 207 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +++ ++RR+ri +++ L+el+P+ kK++ +++LekA+ Y+k Lq PKA55134.1 161 SQSIAAKNRRERITERLKVLQELVPNG-----KKVDLVTMLEKAISYVKFLQ 207 567888*******************98.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MALGSSKAAV FQGFDPSFLM IEDGGGCSEN LFMNSIFCGA EAPSPAIDFE AAGEVHGGGS 60 GYPSSAMLSF EQRLDLWDDY SMSCVDAMEA EYYQMSQFNL QNGSSGSNSR VRDVAQAGHE 120 RGLQKRPLMG SELQLKKKHC GNAYNKKQAK AKSTTATSKD SQSIAAKNRR ERITERLKVL 180 QELVPNGKKV DLVTMLEKAI SYVKFLQLQV KVLAADEFWP AQGEKAPEIS QVKEAIDAIL 240 SSQRGNYSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G37800.1 | 8e-47 | bHLH family protein |