PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA54690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB | ||||||||
Protein Properties | Length: 252aa MW: 28364.9 Da PI: 6.2537 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.5 | 6.3e-18 | 25 | 72 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd+ l ++++ +G g+W++ ar+ g++Rt+k+c++rw++yl PKA54690.1 25 RGPWTVEEDLVLMNYINSHGEGRWNSLARCAGLRRTGKSCRLRWLNYL 72 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.5 | 2.7e-17 | 78 | 121 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ PKA54690.1 78 RGNITPEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 121 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MKMEVHGRAC SSETAQSEEE MDLRRGPWTV EEDLVLMNYI NSHGEGRWNS LARCAGLRRT 60 GKSCRLRWLN YLRPDVRRGN ITPEEQLLIL ELHSRWGNRW SKIAQHLPGR TDNEIKNYWR 120 TRVQKHAKQL QCDVNSKQFK DVMRYLWMPR LLERIRAAAG NSPTAAPNLA ECGTLAGGDP 180 TVGFGGGAEE DKGGDGIQGD VAMEMAGGGW PEGAPSPGGY AYQGLPELEQ CWGLGGETSE 240 NWWNMEDIWH LL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 5e-86 | MYB family protein |