PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA54617.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GeBP | ||||||||
Protein Properties | Length: 381aa MW: 42219.1 Da PI: 4.7533 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 112 | 3.9e-35 | 97 | 195 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +f+rlw++eDei++LqG+++f++++g+ +++ d+ fye++k+++ ++++k+ql+eK+rrLKkK+++ v+++ sgk+++f+++h+q +fe+s++iW PKA54617.1 97 MFHRLWTDEDEITILQGFLEFTTHRGTthASHQyDTGPFYEQMKENLRLDFNKNQLIEKLRRLKKKYRNVVSRMVSGKDFAFKSAHQQATFEISRRIWS 195 799***********************98867778****************************************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence |
MAQAGEKKLA VDAFDDDDEL DYSDMDCDDE EESSAPLTRP PPIEEFSSSA PISVNNPTPS 60 LNHNSVSTQQ NGSITTVPVA LATQIVSAAV VEDSRRMFHR LWTDEDEITI LQGFLEFTTH 120 RGTTHASHQY DTGPFYEQMK ENLRLDFNKN QLIEKLRRLK KKYRNVVSRM VSGKDFAFKS 180 AHQQATFEIS RRIWSASIKS THDSDGDEFT TMAPALSELD HGAEAADSFL NYDRSISRSA 240 RRLLTRSTAD KEVATAAAAA SDNGAAVEVP VVAPPAHPSD DPTQSVVEET VKRCLTPLIK 300 ELVQTVIAGP GICSWIDGGS LLGLDLLHLG IGSLPHSLTT DEKWRNQQIL ELEVHLKRIE 360 LMRDQVKSIL KDLKSEDVDS F |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 290 | 294 | TVKRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 1e-45 | GeBP family protein |