PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA54617.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GeBP
Protein Properties Length: 381aa    MW: 42219.1 Da    PI: 4.7533
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA54617.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF5731123.9e-3597195297
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 +f+rlw++eDei++LqG+++f++++g+   +++ d+  fye++k+++ ++++k+ql+eK+rrLKkK+++ v+++ sgk+++f+++h+q +fe+s++iW 
  PKA54617.1  97 MFHRLWTDEDEITILQGFLEFTTHRGTthASHQyDTGPFYEQMKENLRLDFNKNQLIEKLRRLKKKYRNVVSRMVSGKDFAFKSAHQQATFEISRRIWS 195
                 799***********************98867778****************************************************************6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MAQAGEKKLA VDAFDDDDEL DYSDMDCDDE EESSAPLTRP PPIEEFSSSA PISVNNPTPS  60
LNHNSVSTQQ NGSITTVPVA LATQIVSAAV VEDSRRMFHR LWTDEDEITI LQGFLEFTTH  120
RGTTHASHQY DTGPFYEQMK ENLRLDFNKN QLIEKLRRLK KKYRNVVSRM VSGKDFAFKS  180
AHQQATFEIS RRIWSASIKS THDSDGDEFT TMAPALSELD HGAEAADSFL NYDRSISRSA  240
RRLLTRSTAD KEVATAAAAA SDNGAAVEVP VVAPPAHPSD DPTQSVVEET VKRCLTPLIK  300
ELVQTVIAGP GICSWIDGGS LLGLDLLHLG IGSLPHSLTT DEKWRNQQIL ELEVHLKRIE  360
LMRDQVKSIL KDLKSEDVDS F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1290294TVKRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.21e-45GeBP family protein