PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA54591.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Protein Properties

Length: 355aa MW: 39775.9 Da PI: 6.1348

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA54591.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	50.7	3.2e-16	145	222	15	98
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++p +f+++++++ skt tl+ + g W v+l + + ++++l++GW++F +++ Lk+ +f+vF+++g++ f +v +f PKA54591.1 145 ERRIPPNFLQHISSE--ASKTATLQGPCGSHWHVEL--STTENGTFLSRGWSKFLQDQSLKQFEFLVFQYNGSMHF--TVLIFG 222 568****777644..788************..999999*************************99999..888876 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MPDQTVPGQT LDRVSPKGPL DPAPTAAAVG GADGLLWQHL EGGRVLAEAH AAVDDVVAVR 60 PASWVEGDEP LLGPVNPTAA EPDAARHVLL TVQLVARDYP WQPLVDTEEV AGDGPYLLRR 120 RRRQLQHRLS FPLSRLLHCR ERERERRIPP NFLQHISSEA SKTATLQGPC GSHWHVELST 180 TENGTFLSRG WSKFLQDQSL KQFEFLVFQY NGSMHFTVLI FGTTACLRED LSADQSRKPA 240 ELNGDENQIS MKHPENVSFF TQKRECKTEN DSNLFMNGNK SSEQMPDYIR LVQLWSFPLS 300 YVPSTRGYLS KGWASFSRGN NLEGDFCAFE IVGPVELCVH VFRVLEETTP LLKVS

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MPDQTVPGQT LDRVSPKGPL DPAPTAAAVG GADGLLWQHL EGGRVLAEAH AAVDDVVAVR  60
PASWVEGDEP LLGPVNPTAA EPDAARHVLL TVQLVARDYP WQPLVDTEEV AGDGPYLLRR  120
RRRQLQHRLS FPLSRLLHCR ERERERRIPP NFLQHISSEA SKTATLQGPC GSHWHVELST  180
TENGTFLSRG WSKFLQDQSL KQFEFLVFQY NGSMHFTVLI FGTTACLRED LSADQSRKPA  240
ELNGDENQIS MKHPENVSFF TQKRECKTEN DSNLFMNGNK SSEQMPDYIR LVQLWSFPLS  300
YVPSTRGYLS KGWASFSRGN NLEGDFCAFE IVGPVELCVH VFRVLEETTP LLKVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06220.1	8e-14	B3 family protein