PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA54440.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 332aa    MW: 36903.7 Da    PI: 9.9146
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA54440.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.12.8e-07238278954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P        K++ a++L +A +Y+k L
  PKA54440.1 238 ARHRRERISERLRVLQRLVPGG-----SKMDTASMLDEAANYLKFL 278
                 599*****************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MASRHLIILT GCSRALQMMD RWSRIGSGRP ARFRGRRHTA VLSHPRSHRI SIDGGTINSL  60
MDLTAWDNAN DPTSLWSSQY DDLSELMNHE YGVSESKSDI INEALFSHGD PQGTHLWPWG  120
KKASHELSSS ADSLPLVATP AWDHDLRSKK MFRSSSEDRF QIRFGCSSKP KRSKLDDVDG  180
GNPSRGYEPD TEAIAQVKEM IYRAAAFRPV SLAEEAVAPE RPKRKNVRIS NDPQTVAARH  240
RRERISERLR VLQRLVPGGS KMDTASMLDE AANYLKFLKA QVSAMEKLGK LRSYGGGGGG  300
GDDAVGRGKM PPFAVTCSQY CYAIQTLFPL TQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.11e-39bHLH family protein