PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA54310.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 386aa MW: 42415 Da PI: 6.1359

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA54310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100	1.6e-31	256	311	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv a++qLGG+++AtPk+i+elmk++gLt+++vkSHLQkYRl+ PKA54310.1 256 KARRCWSPELHRRFVIALQQLGGAQVATPKQIRELMKIDGLTNDEVKSHLQKYRLH 311 68****************************************************97 PP
2	Myb_DNA-binding	39.7	1.1e-12	258	309	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v a +qlGg t+k I + m g+t ++ks++qky+ PKA54310.1 258 RRCWSPELHRRFVIALQQLGGAqvaTPKQIRELMKiDGLTNDEVKSHLQKYR 309 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MGSLAPELGL DLKLFGESTI DGFLEDEIPG GGTGGRAAKL EGFVRRLEEE RRKIEAFKRE 60 LPFCMILLTD VIGGLKLELE QCESREHVVP EFISLKSKLE GGEEELGAVK VEKDKEKMDW 120 MSSAQLWSDN CSDESVDCKR DSDEKITGES DVRRDGEVLS LEIKRKSSDA GAFVPFKITP 180 ASRKQEEKLG FSLPDLSLVP TMVKASLSPA TVEDENHVSS AELKSPLRTP AAASSSSGGT 240 HLGLLTHQQQ QQLPRKARRC WSPELHRRFV IALQQLGGAQ VATPKQIREL MKIDGLTNDE 300 VKSHLQKYRL HTRRILNSSP RASRPVVMVG GLWVSQRDHC STSQQSASQS GSPQGPLQLA 360 CAAQAISVTG GDSCEDDCKS ESYSWK

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MGSLAPELGL DLKLFGESTI DGFLEDEIPG GGTGGRAAKL EGFVRRLEEE RRKIEAFKRE  60
LPFCMILLTD VIGGLKLELE QCESREHVVP EFISLKSKLE GGEEELGAVK VEKDKEKMDW  120
MSSAQLWSDN CSDESVDCKR DSDEKITGES DVRRDGEVLS LEIKRKSSDA GAFVPFKITP  180
ASRKQEEKLG FSLPDLSLVP TMVKASLSPA TVEDENHVSS AELKSPLRTP AAASSSSGGT  240
HLGLLTHQQQ QQLPRKARRC WSPELHRRFV IALQQLGGAQ VATPKQIREL MKIDGLTNDE  300
VKSHLQKYRL HTRRILNSSP RASRPVVMVG GLWVSQRDHC STSQQSASQS GSPQGPLQLA  360
CAAQAISVTG GDSCEDDCKS ESYSWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	1e-51	G2-like family protein