PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA54243.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family AP2
Protein Properties Length: 336aa    MW: 37242.6 Da    PI: 7.6219
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA54243.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.31.4e-16265324155
         AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++gr++A+++d  ++  g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  PKA54243.1 265 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 324
                 78*******************988886678446*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MRKMKSMSSN NWLGFSLSPQ EDQAPQPSPA SLSPPLASSF LLAYPHFAEG DNGGLYSQLS  60
VMPVKSDGSL CAMEAFSKSH HGGSPSLLFF FFFFLDSSFS HFLTCLGAEM VSSSSPKLED  120
FLGCGPEMGT HQYCNLEEEG NGTHQSFRQQ SYFQPLQQGI STNLGGYNNM YQGPFFGEHI  180
SDNAFEGLRN VGLGSVGLLR NGDLKHLSLS MSPGTQSGSL SASEQQIISY ASSDLEPSKK  240
RANCKEGEKQ PVHRKSIDTF GQRTSQYRGV TRHRWTGRYE AHLWDNSCKK EGQTRKGRQV  300
YLGGYDMEEK AARAYDLAAL KYWGPSTHIN FPVRFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-65AP2 family protein