PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA54200.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family B3
Protein Properties Length: 316aa    MW: 34775 Da    PI: 9.1032
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA54200.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3100.11.3e-3172174197
                 EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelv 93 
                 f+kv tpsdv+k++rlv+pk++ae++     + +e++  l +ed+sg++W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F +  g+  + +l+
  PKA54200.1  72 FEKVVTPSDVGKLNRLVIPKQHAEKYfpldTSTHEKGLLLNFEDRSGKTWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGvGEaARDRLF 170
                 99***************************977778999************************************************9544555666666 PP

                 EEEE CS
          B3  94 vkvf 97 
                 + + 
  PKA54200.1 171 IDWK 174
                 6665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MDLSNTRSDN RYYPELDSGR DERIAAAGGQ LTLPPSSSAI ALRWSESDSA EASRAAEAMP  60
APPEAIEKEQ MFEKVVTPSD VGKLNRLVIP KQHAEKYFPL DTSTHEKGLL LNFEDRSGKT  120
WRFRYSYWNS SQSYVMTKGW SRFVKEKRLD AGDTVSFGRG VGEAARDRLF IDWKRRPDPQ  180
LERIPRFPYR GGPSSSSYAH PYLSFARSAA APWAASRLFL SQPPPPVPPP ATSYFYFRSA  240
AVLPSAQPDR PMVLDSVPVV HGMGPAKRVR LFGVNLEPHD GAGEDEAAGV LELRLGGPID  300
SSAGASSSSS SSFHLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.13e-64B3 family protein