PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PKA53965.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 126aa MW: 14198.2 Da PI: 10.0836 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 52.8 | 5.4e-17 | 71 | 105 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ Cg t TplWR+gp g+kt CnaCG+++rk+++ PKA53965.1 71 CQLCGETVTPLWRNGPHGPKTACNACGIRFRKEEK 105 999*****************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 126 aa Download sequence |
MEYRSKFTLS FRTDSFSSSL LLSTSLSPAS SNDGMLAERD LLQRFIDSNY ENSGIDVNLR 60 LSPPRIPVKR CQLCGETVTP LWRNGPHGPK TACNACGIRF RKEEKKLDTS LTLAPPCSIR 120 SRRNKF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G36620.1 | 2e-15 | GATA family protein |