PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53755.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 571aa    MW: 63646.7 Da    PI: 4.9294
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS456.31.9e-1392025712374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lL+ecA a+s+g+ e+aqa++++l++ +s +gdp qRlaay++e+Laar+a+s+++lykal+++e +   +s++l+a+++++e++P++kf++++aN 
  PKA53755.1 202 KQLLFECAFAISEGNVEEAQAMITELRQVVSIQGDPPQRLAAYLVEGLAARIASSGQGLYKALKCKEPP---TSDRLSAMQILFEICPCFKFGFMAANG 297
                 589*****************************************************************9...9************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 aI e ++ eervHi+Dfdi+qG Q+++L+qaL++R+++pp+lRiTgv++pes+      l+ +g+rL+k+Aee+gvpfef++ +a ++ d+++++L+++
  PKA53755.1 298 AIAETFKDEERVHIVDFDINQGSQYITLIQALSTRQAKPPRLRITGVDDPESVqrAVGGLKVIGQRLEKLAEEVGVPFEFRA-IAAKTIDVTPSMLDCR 395
                 ***************************************************99878889***********************.588888999******* PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 pgEal+Vn+++qlh+++desvs+ ++rd++L++vks++Pk+v+vveq++++n+++F+ rf+e  +yysa+f+sl+a+lpres +r++vEr++l+r+ivn
  PKA53755.1 396 PGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSMNPKLVTVVEQDVNTNTAPFFPRFVEVYNYYSAVFESLDATLPRESPDRMNVERQCLARDIVN 494
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +vacega+r+er e ++kWr+r+++aGF + pls++++  +++ll+ + ++ y+v+ee+g+l++gW+d+ Lv++SaW+
  PKA53755.1 495 IVACEGADRIERYEAAGKWRARMTMAGFISCPLSSYVNGAIRSLLKSYCDR-YKVKEENGALYFGWEDKILVVASAWK 571
                 *************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    
MSLMRSPDSS TSYVELDHYG RKTGGDTSGL SSSQRFSSDK LRLQYGLSSY QSDIYGQQYY  60
NSSSSGLNTG NSMHLSSPSV PQVSSGSYHL MANARSIISD NPYSSCFTSV RHHVAHSVSE  120
SQSPDPEIDY NEFEIRLKLQ ELERTLLADN DEDFVDPCQE MIIDEDWAES IKSLVIPNSP  180
KESSSDSNIS SITSNRDPRT PKQLLFECAF AISEGNVEEA QAMITELRQV VSIQGDPPQR  240
LAAYLVEGLA ARIASSGQGL YKALKCKEPP TSDRLSAMQI LFEICPCFKF GFMAANGAIA  300
ETFKDEERVH IVDFDINQGS QYITLIQALS TRQAKPPRLR ITGVDDPESV QRAVGGLKVI  360
GQRLEKLAEE VGVPFEFRAI AAKTIDVTPS MLDCRPGEAL VVNFAFQLHH MPDESVSTVN  420
QRDQLLRMVK SMNPKLVTVV EQDVNTNTAP FFPRFVEVYN YYSAVFESLD ATLPRESPDR  480
MNVERQCLAR DIVNIVACEG ADRIERYEAA GKWRARMTMA GFISCPLSSY VNGAIRSLLK  540
SYCDRYKVKE ENGALYFGWE DKILVVASAW K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein