PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53649.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 461aa    MW: 49373.1 Da    PI: 5.2607
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53649.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS301.61.9e-92614572373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...........sseelaalkl..fsev 87 
                 ++lL++cA+a++s+d++laq++L+ l+++a pdgd++qRl+a f++AL  r +rs+s  ++al++  +s               s +l+a++l  f ++
  PKA53649.1  61 EQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTAAFLRALIVRASRSGSASCAALASAMASVAAapshpsvaaadPSLRLSAVSLagFIDL 159
                 79****************************************************88877766655555444434335544444333444445588**** PP

        GRAS  88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvlv 182
                 +P+++f++ +aN aI eaveg + +Hi+D++ ++ +Q p+L+++La Rp+gpp +R+T+     ++        l e+g++L +fA++ +v +ef+++ 
  PKA53649.1 160 TPWHRFGFSAANAAIAEAVEGFQVIHIVDLSTTHSMQLPTLIDSLAGRPDGPPFIRLTVPCFDGNSppplLDMPLDELGSKLVNFARSRNVGMEFRAVP 258
                 **********************************************************9665444456788899***********************95 PP

        GRAS 183 akrledl..eleeLrvkp......gEalaVnlvlqlhrlldesv..sleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
                 ++ ++ l   +e+Lrv++       Eal++n++++lhr++des+  s++s+r+++Lk ++sl P++vvvv+++ad ++++ + r+  a++y++  fd++
  PKA53649.1 259 SSPTDGLqsMIEQLRVQQlingheTEALIINCHMMLHRIPDESAgaSIPSPRTAFLKSLRSLDPTLVVVVDEDADFTAGDVVGRLRAAFNYMWIPFDAV 357
                 5444444223666666666666679*****************97225666************************************************* PP

        GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                 e+ lp  se+r+ +E++ +g++i+nv+a+eg  r+er et ++W +r++ aGF+   ++e+aa+++k +l +++  g+ ++ +++ lvl+Wk++ +v++
  PKA53649.1 358 ETFLPVGSEQRRRYEAA-VGWKIENVIAQEGVGRVERLETRGRWVQRMRGAGFHGGGFGEEAAAEVKGMLDEHS-AGWGMKRDEDDLVLTWKGHDVVFA 454
                 *****************.*******************************************************9.8899999***************** PP

        GRAS 371 SaW 373
                 SaW
  PKA53649.1 455 SAW 457
                 *** PP

Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    
MMQFTESAAP APPHYSSGFP GLCLDLAAAG GANGGAVRSR PWPDLPSSVK SLGSYNAACM  60
EQLLVHCANA IESNDATLAQ QILWVLNNIA PPDGDSNQRL TAAFLRALIV RASRSGSASC  120
AALASAMASV AAAPSHPSVA AADPSLRLSA VSLAGFIDLT PWHRFGFSAA NAAIAEAVEG  180
FQVIHIVDLS TTHSMQLPTL IDSLAGRPDG PPFIRLTVPC FDGNSPPPLL DMPLDELGSK  240
LVNFARSRNV GMEFRAVPSS PTDGLQSMIE QLRVQQLING HETEALIINC HMMLHRIPDE  300
SAGASIPSPR TAFLKSLRSL DPTLVVVVDE DADFTAGDVV GRLRAAFNYM WIPFDAVETF  360
LPVGSEQRRR YEAAVGWKIE NVIAQEGVGR VERLETRGRW VQRMRGAGFH GGGFGEEAAA  420
EVKGMLDEHS AGWGMKRDED DLVLTWKGHD VVFASAWLPS F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-137GRAS family protein