PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA53556.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 1079aa MW: 120651 Da PI: 5.4081

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA53556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	63.3	7.3e-20	70	207	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkya..tgkrknratk..sgyWkatgkd 89 p+G++F+P+deel+++ L++ +g+ ++ + + ++e + ++P+ Lp +k++ + yfF++ ++ ++ + +r+++ + + W++ ++ PKA53556.1 70 PRGVKFDPSDEELLSHLLAEVGKGEAkrhplISKFIIsLNEDhGFGIIHPQFLP-GIKKDGSMSYFFHPISEMHKprQIERQKKYKNsfEVLWHTICRT 167 89**********8887776666656666633333335544378899**.777888899988877633233444422234788*** PP NAM 90 kevlskkgelvglkktLvfykgrapkge..ktdWvmheyrl 128 k++l+ +g + g k++++fy a+ g+ t+Wvmh+y++ PKA53556.1 168 KTLLQ-DGIHQGSKDVMAFYARPANGGKfeVTNWVMHQYHI 207 9.999*******65444443338******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1079 aa Download sequence
MHIQGVRAEH PERDRQKDDL DHLPLKVRGK MLLSPGTPCS SSNASSEASN SNRSNPEFAK 60 LSSLEWPDFP RGVKFDPSDE ELLSHLLAEV GKGEAKRHPL ISKFIISLNE DHGFGIIHPQ 120 FLPGIKKDGS MSYFFHPISE MHKPRQIERQ KKYKNSFEVL WHTICRTKTL LQDGIHQGSK 180 DVMAFYARPA NGGKFEVTNW VMHQYHIISD GVEEDLVVSK IFYQIPSKRD EQDTLAYFME 240 DSVAELAGVR ASPFVGHNNP VEILHAQSIL FKGSSQVVDH DRGDENAGDL GCPSFFNSQK 300 SPTSVFEKAA INSEQHMGGA LASDDLTLRQ LESTCEVTDK DNMCDKVEIN CKKKNLTEKK 360 NDGFPMILCD HDSSINRSIF EGVKDDTCFA DEEPIRSEDS CGGVGSEQDV QKIVVDPKNK 420 HQYEVEISNF RSCGGHISGE TLDTGSKLSG EAEILLVSAT STEHRIVLES ASNFSTVLGL 480 PVGNVKSEPS EGIGTENISE KVTNKKDSVL PAILPVNIKA EPSEELETYN ATKENTEKLS 540 SPSLVVHPTK SSKVNPREIL IPQYCTSKEG KSISKKTCVP EETLTTMISD LDELLSATTG 600 QIDQHPEVDA NLSDGFLFSS ENLYRAVGSQ PLDQPSNTRV NFLAGDNQGH AVLFRNLLKE 660 PKSILSTCNQ IHSDNIRGNY IMKTENNNEL PDDFDPDVLD HIPLRNRLHS LVSEGCVLFN 720 LDERILEKVH PQTSDCSSVS SVIGKASLFS IRRKRKNAAM NLVENALERY APEDRVQFDS 780 GYIPGNASTS DCCSVGSVND KTSLFSIKRK RKKTATDSLE KALEEDAPGL LQVLLDRGIA 840 VEEIKLYGDA EENDLLGSSL EEDSFQELET VMAKLFSERL SPLRFSVDRP MKGSRAVYCL 900 ACLLSLIEQA RYLQFRTIDV EWGWCRDLHS FIFIFRPHNR IVLERPEYGY ATYFFELVGS 960 LAIDWQIKRL VTAMKLTNCS RVTLLENKPL LVGEDLTEGE GRVLQAYGWT PNTGLGTMLN 1020 YCDRVVHDRR NEMFVSDWRA KIGRLLMSGY DCGRMVVPNV PKKASEYLTS QKTEIKLEF

Sequence ? help Back to Top

Protein Sequence Length: 1079 aa Download sequence

MHIQGVRAEH PERDRQKDDL DHLPLKVRGK MLLSPGTPCS SSNASSEASN SNRSNPEFAK  60
LSSLEWPDFP RGVKFDPSDE ELLSHLLAEV GKGEAKRHPL ISKFIISLNE DHGFGIIHPQ  120
FLPGIKKDGS MSYFFHPISE MHKPRQIERQ KKYKNSFEVL WHTICRTKTL LQDGIHQGSK  180
DVMAFYARPA NGGKFEVTNW VMHQYHIISD GVEEDLVVSK IFYQIPSKRD EQDTLAYFME  240
DSVAELAGVR ASPFVGHNNP VEILHAQSIL FKGSSQVVDH DRGDENAGDL GCPSFFNSQK  300
SPTSVFEKAA INSEQHMGGA LASDDLTLRQ LESTCEVTDK DNMCDKVEIN CKKKNLTEKK  360
NDGFPMILCD HDSSINRSIF EGVKDDTCFA DEEPIRSEDS CGGVGSEQDV QKIVVDPKNK  420
HQYEVEISNF RSCGGHISGE TLDTGSKLSG EAEILLVSAT STEHRIVLES ASNFSTVLGL  480
PVGNVKSEPS EGIGTENISE KVTNKKDSVL PAILPVNIKA EPSEELETYN ATKENTEKLS  540
SPSLVVHPTK SSKVNPREIL IPQYCTSKEG KSISKKTCVP EETLTTMISD LDELLSATTG  600
QIDQHPEVDA NLSDGFLFSS ENLYRAVGSQ PLDQPSNTRV NFLAGDNQGH AVLFRNLLKE  660
PKSILSTCNQ IHSDNIRGNY IMKTENNNEL PDDFDPDVLD HIPLRNRLHS LVSEGCVLFN  720
LDERILEKVH PQTSDCSSVS SVIGKASLFS IRRKRKNAAM NLVENALERY APEDRVQFDS  780
GYIPGNASTS DCCSVGSVND KTSLFSIKRK RKKTATDSLE KALEEDAPGL LQVLLDRGIA  840
VEEIKLYGDA EENDLLGSSL EEDSFQELET VMAKLFSERL SPLRFSVDRP MKGSRAVYCL  900
ACLLSLIEQA RYLQFRTIDV EWGWCRDLHS FIFIFRPHNR IVLERPEYGY ATYFFELVGS  960
LAIDWQIKRL VTAMKLTNCS RVTLLENKPL LVGEDLTEGE GRVLQAYGWT PNTGLGTMLN  1020
YCDRVVHDRR NEMFVSDWRA KIGRLLMSGY DCGRMVVPNV PKKASEYLTS QKTEIKLEF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	809	813	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	9e-42	NAC family protein