PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA53416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | E2F/DP | ||||||||
Protein Properties | Length: 249aa MW: 28007.4 Da PI: 10.1195 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 71.8 | 7.9e-23 | 147 | 211 | 1 | 70 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwk 70 r+++sL llt+kfl+ll ++++g+++ln++a+ L dv ++RR YDi+NVLe+++liek+ kn ir k PKA53416.1 147 RYDSSLSLLTKKFLSLLLEARDGTLDLNKAAHVL---DV--QKRRMYDITNVLEGIGLIEKSLKNMIRLK 211 6899******************************...**..************************99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MSGVEGSSLA QRHLPLRPPE ILPRPPNPYF RFGPGEFPGF QCLFSGVSEK GKAPVQSLAP 60 FGRAFPLKND FIRKDDFGAS EAKSCKILVK EEQEDEKGQH ILQPASQKVL KKRRKQITTR 120 HKACEPREPE SADAAASNGL LGASSCRYDS SLSLLTKKFL SLLLEARDGT LDLNKAAHVL 180 DVQKRRMYDI TNVLEGIGLI EKSLKNMIRL KDTHMSKPKE VDGYKARLKA EVKTLHEEEK 240 RLDRLIRYV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 111 | 115 | KKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G47870.1 | 2e-26 | E2F/DP family protein |