PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53329.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 274aa    MW: 30246.1 Da    PI: 6.5453
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53329.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.2e-19134184255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp+ +g  +r++lg+f+ta eAa+a+++a+ +++g
  PKA53329.1 134 RYRGVRQRP-WGKFAAEIRDPKRRG--ARIWLGTFDTAVEAARAYDRAAFQMRG 184
                 7********.**********96554..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MANQHYSAID LIREHLLGDA AAVSLEELLS GLPTPPATTV SHLGELTVSD YLDQDEILIA  60
PSAAPAASAA DLRRGDFRFR EKPASIIRFG GDPLPSSPSD LRRLMLDIPR RAAPKVEWID  120
GSSGEQSESS DFRRYRGVRQ RPWGKFAAEI RDPKRRGARI WLGTFDTAVE AARAYDRAAF  180
QMRGSKAILN FPNEIGSSSS SMRPQETAAE KRRRQDAAVE EEKGSKRQRS VETELPLTPS  240
IWTAIWEGGD VTELFNLPPL SPHPAVGFPQ LMVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-38ERF family protein