PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53315.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GATA
Protein Properties Length: 336aa    MW: 38115.9 Da    PI: 7.2642
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53315.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.41.5e-16741135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C++Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  PKA53315.1  7 CHHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGS 41
                ****************66666***********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MGKNGPCHHC GVTSTPLWRN GPPEKPILCN ACGSRWRTKG SLANYTPLHA REPIELEEHK  60
VVKIKSMPYK TKEQKSRKQI NDVVESERET PFSSYDQSYV RALEMDASNR SSSGSAISYS  120
ESCAHFGAID ASDWIGSTQS NAWDSLVPSK KRSVNLPKSS PVEKLTRDLY SIWHEQQSSN  180
LSGSSDEDLL FEGETPSGSA EIGHGGMLLR YPRSKAMEEE SEASSLPLDN KLSNEASFPL  240
NSESKRTTLP SVGKLKKSQD HAKRHRFSPD NMNMLRDKDS LLRFTDLKDV VNLEVFMELL  300
TLEEQQRLMR YLPSIDTVNI YIYIYIYIYI YIYRTV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.37e-77GATA family protein