PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53307.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Trihelix
Protein Properties Length: 316aa    MW: 35262.7 Da    PI: 11.1332
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix66.84.6e-2146139186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqle 86 
                 +Wt++e+laLie +r++++++rrg+l++++Weev+  +            ++++qC++k+e+l+kr++ ++ ++     + + ss++p+f  +e
  PKA53307.1  46 CWTNDETLALIESYRDKWHAVRRGNLRAADWEEVATDVarrcarLPAATPKTSVQCRHKIEKLRKRFRSERMRSLTVrpHVPPSSSWPFFPLME 139
                 8*************************************888877677889*******************99887665223445679****9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MASPPLSPSP AAAAAAAAAA SDGGRSPPLA PPSATPPSRR GLPPPCWTND ETLALIESYR  60
DKWHAVRRGN LRAADWEEVA TDVARRCARL PAATPKTSVQ CRHKIEKLRK RFRSERMRSL  120
TVRPHVPPSS SWPFFPLMES LEYPPRARSD SGSDSDYAGD VRSHHRVMSN GRGGAEGLGF  180
SIPKAVRSRI AHASPALAVT AGVRAVKVKA EYSMNGVKPK MEEMRRRLER KRKEEREREA  240
DAVGEMVSAL RMVGEGFMRM ERMKMDMVRE MERMKMEMEL KRAQMILDSQ RRIVDAFVKG  300
LVGREKKKAK VSPPQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.12e-29Trihelix family protein