PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA53293.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

SRS

Protein Properties

Length: 415aa MW: 46337.9 Da PI: 8.8703

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA53293.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	25.4	4e-08	67	101	5	39
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv 39 + +C CGn a+ C ++ C+ CC C hv PKA53293.1 67 KPKCSKCGNVARSRCPFQSCKSCCAKAQNPCPIHV 101 568*******************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MHLVDMGYED PGPKTSSDNL LSSIMAASSP APSNKVGDAL FTSLAINGNL KSISLDTPKQ 60 NLRGLNKPKC SKCGNVARSR CPFQSCKSCC AKAQNPCPIH VLKQNSTLPD KPLPSTIPSF 120 EQQSTDTASS GASWRLTALR QLSAAYANSL RARKPLTRKV QKLLPFVILR ELHVIFLTEV 180 LSSSAVTDSS LFFKDAINTN KWRFSKLKEH IEGNIEVENE AFERYLQNVR FLEEVFSTNF 240 KAKSLDQSTV DPTSDDKVEK LITSMKAKQK SNTNKAASIR ERMQKLVNEK LRKLQESEHV 300 IDQISSKIDE LNAYRNPKKL KKFEDDRAEK TMVMDDLIDK LYKARSLEDI ESGLEMKLKS 360 NVKVAEDHSS SKEEDASDLI PSFPLSKLCN VVHISQNEVS DINAQISSTL QLAEL

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MHLVDMGYED PGPKTSSDNL LSSIMAASSP APSNKVGDAL FTSLAINGNL KSISLDTPKQ  60
NLRGLNKPKC SKCGNVARSR CPFQSCKSCC AKAQNPCPIH VLKQNSTLPD KPLPSTIPSF  120
EQQSTDTASS GASWRLTALR QLSAAYANSL RARKPLTRKV QKLLPFVILR ELHVIFLTEV  180
LSSSAVTDSS LFFKDAINTN KWRFSKLKEH IEGNIEVENE AFERYLQNVR FLEEVFSTNF  240
KAKSLDQSTV DPTSDDKVEK LITSMKAKQK SNTNKAASIR ERMQKLVNEK LRKLQESEHV  300
IDQISSKIDE LNAYRNPKKL KKFEDDRAEK TMVMDDLIDK LYKARSLEDI ESGLEMKLKS  360
NVKVAEDHSS SKEEDASDLI PSFPLSKLCN VVHISQNEVS DINAQISSTL QLAEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32730.1	1e-65	SRS family protein