PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA53257.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | B3 | ||||||||
Protein Properties | Length: 146aa MW: 16692.3 Da PI: 8.3302 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 44.6 | 2.5e-14 | 60 | 130 | 28 | 98 |
--..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-..SS.SEE..EEEEE- CS B3 28 gkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld..gr.sefelvvkvfr 98 +++ + l++ +g++W v++ + +++ +l++GW++F +n++k+gD +vF+l+ g+ ++++++v++++ PKA53257.1 60 YVPSS-SALIILCCRGKEWAVTC--SVYKKFALLSRGWRKFLADNNMKAGDGCVFELMnsGEmEQKKFRVQILD 130 34433.367777789********..99**9**************************875566777778888776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MAVQWPLWPF KNETEEGRVD GRGVHLIRRP KVVYLLSSSE APSMADFFFF EFIPSNFRQY 60 VPSSSALIIL CCRGKEWAVT CSVYKKFALL SRGWRKFLAD NNMKAGDGCV FELMNSGEME 120 QKKFRVQILD GQLPQHGSAD HPVLID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49480.1 | 3e-09 | B3 family protein |