PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA53246.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 324aa MW: 35964.2 Da PI: 9.0645

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA53246.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101	7.6e-32	157	210	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rF++ave LGG+++AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PKA53246.1 157 PRMRWTSTLHARFIHAVELLGGHQRATPKSVLELMDVKDLTLAHVKSHLQMYRT 210 9****************************************************7 PP
2	Myb_DNA-binding	46.5	8.2e-15	158	209	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++++av++lGg+ t+k++ + m k +tl ++ks++q+y+ PKA53246.1 158 RMRWTSTLHARFIHAVELLGGHqraTPKSVLELMDvKDLTLAHVKSHLQMYR 209 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MELFPAQPDL SLQICPPTSS RWGSSTEEII DFGFWRRTQS SNSAASPPLL STTVLPQSNF 60 AGASGHSFAD LSLSNSTFSH HHHPPFLHES YGQDLLSLRP IRGIPVYHSP PSFHPLPPHH 120 LCEPAMAANS YSLPFPRPSS SSRLLPRFPA KRGIRAPRMR WTSTLHARFI HAVELLGGHQ 180 RATPKSVLEL MDVKDLTLAH VKSHLQMYRT VKTTDKATLS GQLTEPIEMF DDDFPDLNSA 240 RGSDQSSLQN GKNSTNSYGL WRNSSSRGGF FHDKPKDYST TGSISSLESE KQSRSFEMSD 300 LNSPSVSETS LKKPNLEFTL GRSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	3e-45	G2-like family protein