PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA52738.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GATA | ||||||||
Protein Properties | Length: 154aa MW: 17067.6 Da PI: 10.2199 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.3 | 2.8e-20 | 34 | 68 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ C+ttkTplWR gp+g+ktLCnaCG++yrkk++ PKA52738.1 34 CADCRTTKTPLWRGGPSGPKTLCNACGIRYRKKRR 68 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MDLSGEKGPG SMDPSADPSI RDCQAWDSDG MKCCADCRTT KTPLWRGGPS GPKTLCNACG 60 IRYRKKRRAV MGLKERKVAG DSEAKRKSDD TELDRGSSRK MGSSLKVRML GFGRRETFLK 120 QGRFVQNPKQ RMMGEEEQAA FLLMSLSSGF VYAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49300.1 | 6e-31 | GATA family protein |