PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA52482.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TALE

Protein Properties

Length: 537aa MW: 59685.5 Da PI: 8.0676

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA52482.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.8	2.4e-10	345	382	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LAk++gL+ +qV++WF N R + PKA52482.1 345 FEHflHPYPTDADKQMLAKQTGLSRNQVSNWFINARVR 382 554459******************************87 PP
2	BELL	72.2	8.9e-24	226	279	19	72
BELL 19 VdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +++rY+ y++q+qtv++sFeavagl++a+p++s+Alk +++hFrcLk+a+++q+ PKA52482.1 226 IYRRYRLYYQQVQTVMASFEAVAGLNTAAPFVSMALKSMAKHFRCLKNALSNQL 279 789************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MSSASGRYGA GGEDQMFLYP YHHHENLHAV FYHVPQHSRR EKLRFPPENS PAQAVTSSSL 60 PPLYQDYSLA RLVDDGSCLH EIQQQQGFSL TLSPPPQPPP APVGPLGPFT GYSAVLNRSR 120 FLEPARQLLE EICDLGRGGA VTLICSDPSE MLPVACEMDS AASGPATAGP DEQQWKKAKL 180 ISMMDEACTA MLANHVFYLL WDVHSISKDK LRSCAVIRTV PIRTGIYRRY RLYYQQVQTV 240 MASFEAVAGL NTAAPFVSMA LKSMAKHFRC LKNALSNQLN RINKALGKED LGKSEISGSG 300 LMINSISCSQ QIRGSGSTSS RQPHVWRPQR GLPERAVAVL RAWLFEHFLH PYPTDADKQM 360 LAKQTGLSRN QVSNWFINAR VRVWKPMVEE IHNLEMRQQQ IKSAQTDHNE KNINPAHDMQ 420 LSAAASQPSA SSTATSSSNH DQYSCSRRRP LMNSNADHHH ELSYFPHHIN EDAYSLDYLS 480 VNGGNHSSNG VSLTLGLHQN TAAAAVCQLP EPLPLMHVAR RLGLEDCSDP YVRNWCV

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MSSASGRYGA GGEDQMFLYP YHHHENLHAV FYHVPQHSRR EKLRFPPENS PAQAVTSSSL  60
PPLYQDYSLA RLVDDGSCLH EIQQQQGFSL TLSPPPQPPP APVGPLGPFT GYSAVLNRSR  120
FLEPARQLLE EICDLGRGGA VTLICSDPSE MLPVACEMDS AASGPATAGP DEQQWKKAKL  180
ISMMDEACTA MLANHVFYLL WDVHSISKDK LRSCAVIRTV PIRTGIYRRY RLYYQQVQTV  240
MASFEAVAGL NTAAPFVSMA LKSMAKHFRC LKNALSNQLN RINKALGKED LGKSEISGSG  300
LMINSISCSQ QIRGSGSTSS RQPHVWRPQR GLPERAVAVL RAWLFEHFLH PYPTDADKQM  360
LAKQTGLSRN QVSNWFINAR VRVWKPMVEE IHNLEMRQQQ IKSAQTDHNE KNINPAHDMQ  420
LSAAASQPSA SSTATSSSNH DQYSCSRRRP LMNSNADHHH ELSYFPHHIN EDAYSLDYLS  480
VNGGNHSSNG VSLTLGLHQN TAAAAVCQLP EPLPLMHVAR RLGLEDCSDP YVRNWCV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	9e-66	TALE family protein