PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA51785.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 604aa MW: 64698.1 Da PI: 4.8022 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 446.1 | 2.3e-136 | 214 | 589 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 lv++L++cAeav+++++++a+a+++++s l+s++g +m+++a yf+eALa+r++r l+p+++ + +s+ + + f+e +P+lkf+h+taN PKA51785.1 214 LVHALMACAEAVQQENFQAADAIVKQISLLSSSQGGAMRKVADYFAEALARRIYR--------LHPQQDCSLDSAFSDILQMHFYESCPYLKFAHFTAN 304 689****************************************************........77888776666666666666**************** PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198 qaIlea++g +rvH+iDf+++qGlQWpaL+qaLa Rp+gpps+R+Tg+g+p+ +++++l+++g++La++Ae+++v+fe++ +va++l+dle+ +L+ PKA51785.1 305 QAILEAFAGFRRVHVIDFGMKQGLQWPALMQALALRPGGPPSFRLTGIGPPQLDKTDALQQVGWKLAQLAETIHVDFEYRGFVANSLADLEPYMLESPA 403 ***********************************************************************************************7776 PP GRAS 199 ........gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak....lpres.eerik 284 Ea+a+n++++lh ll+++++le+ v+++++ ++P++v vveqea+hn+++F+erf+eal+yys++fdsle + ++ + ++++ PKA51785.1 404 padgeegePEAVAINSIFELHPLLSRPGALEK----VVSTIRAIRPNIVAVVEQEANHNAGPFVERFTEALHYYSTMFDSLEGGgaagIGDGEqLQDQV 498 777788889*********************99....*********************************************8774444333335899** PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 +++++lgr+i+nvvacegaer+erhetl +Wr+r+ aG++pv+l+++a kqa++ll+ ++ +dgy vee++g+l+lgW++rpL+++SaW+ PKA51785.1 499 MSEVYLGRQICNVVACEGAERTERHETLTQWRRRMAGAGLQPVHLGSNAFKQASMLLSLFAvGDGYGVEENEGCLTLGWHNRPLIAASAWK 589 ******************************************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 604 aa Download sequence |
MKREYMESPI GGGIAGYSME RGKMMGMEDA DGGVDELLAA LGYKVRSTDM ADVAQKLEQL 60 EMAMGSSAAP DDALLSHLAS DTVHYNPSDL SSWVESMLSE VTPPPPLPVA VPPAMSSVSI 120 DFSAEPDHAL RQLNYGGNNV ARRSEPPAES GSRNRKRMRT SPSSSSSSTG GVGGGLIGQA 180 APAIGSMPDS SCSTEPASVV PLVMADTQEA GIRLVHALMA CAEAVQQENF QAADAIVKQI 240 SLLSSSQGGA MRKVADYFAE ALARRIYRLH PQQDCSLDSA FSDILQMHFY ESCPYLKFAH 300 FTANQAILEA FAGFRRVHVI DFGMKQGLQW PALMQALALR PGGPPSFRLT GIGPPQLDKT 360 DALQQVGWKL AQLAETIHVD FEYRGFVANS LADLEPYMLE SPAPADGEEG EPEAVAINSI 420 FELHPLLSRP GALEKVVSTI RAIRPNIVAV VEQEANHNAG PFVERFTEAL HYYSTMFDSL 480 EGGGAAGIGD GEQLQDQVMS EVYLGRQICN VVACEGAERT ERHETLTQWR RRMAGAGLQP 540 VHLGSNAFKQ ASMLLSLFAV GDGYGVEENE GCLTLGWHNR PLIAASAWKV AGTTSSPASV 600 AAGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 0.0 | GRAS family protein |