PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51785.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 604aa    MW: 64698.1 Da    PI: 4.8022
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS446.12.3e-1362145891374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv++L++cAeav+++++++a+a+++++s l+s++g +m+++a yf+eALa+r++r        l+p+++ + +s+ +   +  f+e +P+lkf+h+taN
  PKA51785.1 214 LVHALMACAEAVQQENFQAADAIVKQISLLSSSQGGAMRKVADYFAEALARRIYR--------LHPQQDCSLDSAFSDILQMHFYESCPYLKFAHFTAN 304
                 689****************************************************........77888776666666666666**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIlea++g +rvH+iDf+++qGlQWpaL+qaLa Rp+gpps+R+Tg+g+p+ +++++l+++g++La++Ae+++v+fe++ +va++l+dle+ +L+   
  PKA51785.1 305 QAILEAFAGFRRVHVIDFGMKQGLQWPALMQALALRPGGPPSFRLTGIGPPQLDKTDALQQVGWKLAQLAETIHVDFEYRGFVANSLADLEPYMLESPA 403
                 ***********************************************************************************************7776 PP

        GRAS 199 ........gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak....lpres.eerik 284
                          Ea+a+n++++lh ll+++++le+    v+++++ ++P++v vveqea+hn+++F+erf+eal+yys++fdsle +    ++  +  ++++
  PKA51785.1 404 padgeegePEAVAINSIFELHPLLSRPGALEK----VVSTIRAIRPNIVAVVEQEANHNAGPFVERFTEALHYYSTMFDSLEGGgaagIGDGEqLQDQV 498
                 777788889*********************99....*********************************************8774444333335899** PP

        GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +++++lgr+i+nvvacegaer+erhetl +Wr+r+  aG++pv+l+++a kqa++ll+ ++ +dgy vee++g+l+lgW++rpL+++SaW+
  PKA51785.1 499 MSEVYLGRQICNVVACEGAERTERHETLTQWRRRMAGAGLQPVHLGSNAFKQASMLLSLFAvGDGYGVEENEGCLTLGWHNRPLIAASAWK 589
                 ******************************************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 604 aa     Download sequence    
MKREYMESPI GGGIAGYSME RGKMMGMEDA DGGVDELLAA LGYKVRSTDM ADVAQKLEQL  60
EMAMGSSAAP DDALLSHLAS DTVHYNPSDL SSWVESMLSE VTPPPPLPVA VPPAMSSVSI  120
DFSAEPDHAL RQLNYGGNNV ARRSEPPAES GSRNRKRMRT SPSSSSSSTG GVGGGLIGQA  180
APAIGSMPDS SCSTEPASVV PLVMADTQEA GIRLVHALMA CAEAVQQENF QAADAIVKQI  240
SLLSSSQGGA MRKVADYFAE ALARRIYRLH PQQDCSLDSA FSDILQMHFY ESCPYLKFAH  300
FTANQAILEA FAGFRRVHVI DFGMKQGLQW PALMQALALR PGGPPSFRLT GIGPPQLDKT  360
DALQQVGWKL AQLAETIHVD FEYRGFVANS LADLEPYMLE SPAPADGEEG EPEAVAINSI  420
FELHPLLSRP GALEKVVSTI RAIRPNIVAV VEQEANHNAG PFVERFTEAL HYYSTMFDSL  480
EGGGAAGIGD GEQLQDQVMS EVYLGRQICN VVACEGAERT ERHETLTQWR RRMAGAGLQP  540
VHLGSNAFKQ ASMLLSLFAV GDGYGVEENE GCLTLGWHNR PLIAASAWKV AGTTSSPASV  600
AAGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.10.0GRAS family protein