PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51445.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family AP2
Protein Properties Length: 263aa    MW: 29394.8 Da    PI: 7.9715
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51445.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.85e-17130179155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  PKA51445.1 130 SQYRGVTFYRRTGRWESHIWD------SgKQVYLGGFDTAHAAARAYDRAAIKFRG 179
                 78*******************......44************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MWDLNDTPEN MEPVEVPSGG SDEADDGEGF SQRKDMGFDI EDSGSLAVVM EASEEGEGDS  60
GGGMDRISGV SVRGTPTVVV THKFFPSGEE QQPRANWVGF DFRRSPPADV REGSEQPAKK  120
IRRGPRSRSS QYRGVTFYRR TGRWESHIWD SGKQVYLGGF DTAHAAARAY DRAAIKFRGV  180
NADTNFSLQN YEDDLKQMGS LSKEEFVLVL RRQSTGCPRG SSKFRGVTLH KCGRWEARMG  240
QFLGKKYRLL LVSTFRHGCI LCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.19e-67AP2 family protein