PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51440.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C3H
Protein Properties Length: 371aa    MW: 40517.9 Da    PI: 9.1877
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51440.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.11.1e-068191526
                -TTTTT-SS-SS CS
     zf-CCCH 15 CkyGdrCkFaHg 26
                C+yGdrCkF H+
  PKA51440.1  8 CQYGDRCKFLHV 19
                ***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MQSLLFSCQY GDRCKFLHVT QQQPKSRPFG TVSQSFAQFQ QTSQPPEPNP FGFGSQSSSQ  60
FQQTSQQPKR NPFGFGVTNS FQSNVVGNFG ARHQNTSKAF ENKWIRPTAS TNSTPSQNSQ  120
AQSVVHKCTD PESCKRQIVE DFKNEAPLWK LTCYGHWKYL PCDIVGDVSY EELREAAYED  180
AKRGLALQSI VERERNLLTS KLAEFDNLLR NPYVIKHSGL TEVNHFPANN TTSTLITHSN  240
KPPTVSSFSQ LGTSTTVGNN TNFGTESPGI QSSIGFGHPS FPQNKSHILG GIEKKIGTSG  300
SFGSQKPMLG FENLSGPINS GSNNGFMAMG SERSLFPSIS PAFTNSSSNQ SSVYLDGLKP  360
NSSGVKQASA V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.16e-58C3H family protein