PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51338.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

FAR1

Protein Properties

Length: 739aa MW: 85969.7 Da PI: 8.4918

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51338.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.5	7e-21	42	131	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++YA +GFsvrks++ + +++ +r++vCs+ g++++ek + te+ + t+ r+gC a+++ k + +g+w ++kl +eHnH+la PKA51338.1 42 IYSKYAFLTGFSVRKSHNGYWPGTRKPRNREYVCSRAGFKNSEKANeTEQLKFTKLDGRCGCLAMVRFKVDISGNWWIDKLIEEHNHDLA 131 7******************99999*********999998846666779999*****************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
MLSNILHYIL IQGLAKTESC DVLKLPEILR TPVHNEDQAY DIYSKYAFLT GFSVRKSHNG 60 YWPGTRKPRN REYVCSRAGF KNSEKANETE QLKFTKLDGR CGCLAMVRFK VDISGNWWID 120 KLIEEHNHDL ASPEKRHLLR SHRAIHEADA AALRTLSKVG IRTIDAFSYI TQQAGDNYVN 180 RERLQRIEAG DAFSLLKIFR ERRCVDPFFD WDVKLDEDQR LTNFLWVDGK CKMDYDAFGD 240 VVIFDTSYRM NKYNFVFAHF IGVNNHWQDI FFGSTFLIDE TVNSFEWLFQ SFLTMMNEKQ 300 PITIFTDQNE AMCKAIHNAF PKTRHRLCQW HILKNVRSMV HVIEDNDQVR DLFYQCMRSC 360 DTPEEFEMKW AEMLGKGGLH EHVWLCNLYK IRHKWSTAMN KDVFDMGILS TQRSESSNNI 420 CHDISKPTST LTDCFLGLER AIVQWRQVEA DEDFKCSQNC ATPTVQHSPL LNQAREVYTV 480 KIYNIFQKSL MNGACGSRAI EVSEGENMKV YLVGRFGDQK EYRVSFNTVS LDVNCTCKKF 540 ETVGLLCSHA LRVLTMMNVM VLPDQYIVKR WTKNARKNIY YISERPTCDN QSQSQEFLNY 600 ANRFSYQLIM KAQGSECTRK LFVEHMDRLD AAINNKMECH GMLPTFETKS PRRVMDVLLR 660 DPPKKSKGVS NAQLKGGWEK NSRKRGMMLL IKSIFILLIL IYVTYILTIS YYSKESNIRT 720 TAFNCACTGS LNASYISRL

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

MLSNILHYIL IQGLAKTESC DVLKLPEILR TPVHNEDQAY DIYSKYAFLT GFSVRKSHNG  60
YWPGTRKPRN REYVCSRAGF KNSEKANETE QLKFTKLDGR CGCLAMVRFK VDISGNWWID  120
KLIEEHNHDL ASPEKRHLLR SHRAIHEADA AALRTLSKVG IRTIDAFSYI TQQAGDNYVN  180
RERLQRIEAG DAFSLLKIFR ERRCVDPFFD WDVKLDEDQR LTNFLWVDGK CKMDYDAFGD  240
VVIFDTSYRM NKYNFVFAHF IGVNNHWQDI FFGSTFLIDE TVNSFEWLFQ SFLTMMNEKQ  300
PITIFTDQNE AMCKAIHNAF PKTRHRLCQW HILKNVRSMV HVIEDNDQVR DLFYQCMRSC  360
DTPEEFEMKW AEMLGKGGLH EHVWLCNLYK IRHKWSTAMN KDVFDMGILS TQRSESSNNI  420
CHDISKPTST LTDCFLGLER AIVQWRQVEA DEDFKCSQNC ATPTVQHSPL LNQAREVYTV  480
KIYNIFQKSL MNGACGSRAI EVSEGENMKV YLVGRFGDQK EYRVSFNTVS LDVNCTCKKF  540
ETVGLLCSHA LRVLTMMNVM VLPDQYIVKR WTKNARKNIY YISERPTCDN QSQSQEFLNY  600
ANRFSYQLIM KAQGSECTRK LFVEHMDRLD AAINNKMECH GMLPTFETKS PRRVMDVLLR  660
DPPKKSKGVS NAQLKGGWEK NSRKRGMMLL IKSIFILLIL IYVTYILTIS YYSKESNIRT  720
TAFNCACTGS LNASYISRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-103	FAR1 family protein