PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50825.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Trihelix
Protein Properties Length: 297aa    MW: 33023.3 Da    PI: 4.7086
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50825.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix46.69.1e-1560136179
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 
                 +Wt qe+l+L+     ++e+  +  +  ++W+ +s+++ +  + rs++qCk kwe l  +y+ki++++++  s++ s +
  PKA50825.1  60 EWTVQETLTLLGEIAAVDEKWLKVLSSYQRWKMISDNCTAMEVVRSSNQCKRKWETLLDDYRKIRKWNSR--SGVDSYW 136
                 5**********99999999999999*******************************************98..4555566 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MEEAQANIVQ ALPAAVSIED TMNHQWKRKI RSLQSKENQS LSTSPAISTS RCTRSQAAPE  60
WTVQETLTLL GEIAAVDEKW LKVLSSYQRW KMISDNCTAM EVVRSSNQCK RKWETLLDDY  120
RKIRKWNSRS GVDSYWSIPE EKRKKFGLPA AYEKEVFDAM DAVIQIEEDQ VEPKTSDSDQ  180
LVDVALSEMP IADADSGPEV ERLSSSPKRL EKALAMTTKL QQNAELVHSI LRGELQDPAG  240
PGSLKLDFAK PSAAETDFAR RQAAELIKAL GDLSDTLDQF AGIVNTGAGE VIVPVDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.14e-38Trihelix family protein