PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA50643.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | ERF | ||||||||
Protein Properties | Length: 206aa MW: 21903.8 Da PI: 9.9869 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.7 | 7.8e-20 | 22 | 72 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +++GVr ++ +gr++AeIrdp++ + r++lg+f+tae+Aa+a++ a+++l+g+ PKA50643.1 22 RFRGVRKRP-WGRYAAEIRDPVK---KSRIWLGTFDTAEDAARAYDSAALALRGA 72 69*******.**********654...5*************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MALRKGRSLA ADAQAAPGGE ARFRGVRKRP WGRYAAEIRD PVKKSRIWLG TFDTAEDAAR 60 AYDSAALALR GAKAKINFPP VPPHASTAGG GSLPIPFFQH QVPLPPPSRP TSSSLSSTVE 120 SFSGPRRLTG GSSSIRLRPL RPLRQPAIPA PPRVLSGDQD CHSDCGSSSS VIDDGDVASA 180 CYQALPFDLN LVPLPDDDLQ CTVLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28370.1 | 2e-20 | ERF family protein |