PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA50533.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB | ||||||||
Protein Properties | Length: 315aa MW: 35352.8 Da PI: 10.5018 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.3 | 1.2e-15 | 95 | 140 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l d+v+ +G+++W++Ia+ + gR++k+c++rw++ PKA50533.1 95 RGHWRPAEDAKLRDLVATFGPHNWNLIAENLE-GRSGKSCRLRWFNQ 140 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 57.5 | 3.2e-18 | 147 | 190 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++T+eE+e+l+ a++++G++ W++I+r ++ gRt++ +k++w+ PKA50533.1 147 RKAFTEEEEERLLAAHRRYGKK-WALISRFFP-GRTDNAVKNHWHV 190 789*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MLSSKLKVSQ QSVSNCSVSS RAMSPQQQIS EAPTLFFSSP APPSSCLQGL NSASPMGFRS 60 KEGLGFQSFN GSKKTRKKSM ESRGHEMKQS KLCSRGHWRP AEDAKLRDLV ATFGPHNWNL 120 IAENLEGRSG KSCRLRWFNQ LDPRINRKAF TEEEEERLLA AHRRYGKKWA LISRFFPGRT 180 DNAVKNHWHV IMARKLREQS CSNIRISSKR PDLRSTNTPP NTNSGESTIS SNREESASTD 240 NDYIDVFFTT TQQPKIRNFP MAPMAGDQFS FSRSTGEAFA ADSMAVLRRV ADLSEEKISL 300 PFFDFLGVGA AQESI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69560.1 | 9e-65 | MYB family protein |